| Name | Version | Summary | date |
| markdup |
0.0.25 |
Fast, accurate BAM deduplication with intelligent UMI detection and correct fragment detection |
2025-11-03 18:22:50 |
| countmut |
0.0.6 |
Ultra-fast strand-aware mutation counter |
2025-10-24 07:27:37 |
| compas-model |
0.9.0 |
This package provides a universal model datastructure for design, analysis, fabrication, and construction of AEC objects. |
2025-09-06 06:52:33 |
| coalispr |
0.7.8 |
Small RNA-Seq analysis starting from bedgraph files |
2024-10-14 11:00:33 |
| microsplit |
0.1.0 |
First tool to treat Micro-C data. Before using Microsplit, you need to perform an initial alignment of reads using Bowtie2 with the `--local-very-sensitive` mode and the `-xeq` option to obtain explicit CIGAR strings. After, Microsplit analyse CIGAR score and fragments reads to make new pairs. The cutting site accuracy is really fine. Sensibility is 0,92 and specifity 0,71 |
2024-07-31 13:39:36 |
| smallgenomeutilities |
0.4.1 |
A collection of scripts that are useful for dealing with viral RNA NGS data. |
2024-05-27 22:02:59 |
| scbamtools |
0.6 |
High performance Cython + Python tools to process BAM files with tags as they arise in single-cell sequencing |
2024-05-21 13:53:17 |